Portfolio item number 1
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Posts by Collection
portfolio
Portfolio item number 2
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publications
Global immune characterization of HBV/HCV-related hepatocellular carcinoma identifies macrophage and T-cell subsets associated with disease progression
Published in Cell Discovery, 2020
Recommended citation: Song, G., Shi, Y., ..., Jin, Z. et al. Global immune characterization of HBV/HCV-related hepatocellular carcinoma identifies macrophage and T-cell subsets associated with disease progression. Cell Discov 6, 90 (2020). https://www.nature.com/articles/s41421-020-00214-5
Single cell gene fusion detection by scFusion
Published in Nature Communications, 2022
Recommended citation: Jin, Z., Huang, W., Shen, N. et al. Single-cell gene fusion detection by scFusion. Nat Commun 13, 1084 (2022). https://doi.org/10.1038/s41467-022-28661-6 https://www.nature.com/articles/s41467-022-28661-6
TAGET: a toolkit for analyzing full-length transcripts from long-read sequencing
Published in Nature Communications, 2023
Recommended citation: Xia, Y., Jin, Z., Zhang, C. et al. TAGET a toolkit for analyzing full-length transcripts from long-read sequencing. Nat Commun 14, 5935 (2023). https://www.nature.com/articles/s41467-023-41649-0
MetaCONNET: A metagenomic polishing tool for long-read assemblies
Published in PLoS ONE, 2024
Recommended citation: Sun, B., Guo, J., Jin, H. et al. MetaCONNET A metagenomic polishing tool for long-read assemblies. PLoS ONE 19(12) e0313515 (2024). https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0313515
Detecting copy-number alterations from single-cell chromatin sequencing data by AtaCNA
Published in Cell Reports Methods, 2025
Recommended citation: Wang, X., Jin, Z., Shi, Y., & Xi, R. (2025). Detecting copy-number alterations from single-cell chromatin sequencing data by AtaCNA. Cell Reports Methods. https://www.cell.com/cell-reports-methods/fulltext/S2667-2375(24)00329-1
talks
2021 Peking-Tshinghua joint statistics colloquium
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I introduced my scFusion on the colloquium.
Introducing scFusion and TAGET
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I introduced scFusion and TAGET. I also shared the experience and struggles in my Ph.D. career.
基于单细胞和三代测序的转录组分析方法
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第十二届全国生物信息学和系统生物学学术大会的“生物信息学算法”分会场报告
teaching
Calculus II (C) 2018 Spring
Undergraduate course, Health Science Center, Peking University, 2018
I really had a great time with my students/friends.
Calculus I(B) 2018 Fall
Undergraduate course, Guanghua School of Managerment, Peking University, 2018
My first exercise class. One of my favorate student gave Christmas greeting card to me.
Calculus II (B) 2019 Spring
Undergraduate course, Guanghua School of Managerment, Peking University, 2019
Really happy with my students.
Calculus I(B) 2019 Fall
Undergraduate course, Guanghua School of Managerment, Peking University, 2019
My students really loved me and they gave many small gifts and thanks letters to me.
Calculus II (B) 2020 Spring
Undergraduate course, Guanghua School of Managerment, Peking University, 2020
Due to the COVID-19, all students stayed at home and I had to give the online courses to them.
Calculus I (B) 2020 Fall
Undergraduate course, Peking University, 2020
My students came from several different schools, with different majors. They believed I was a good lecturer, and I would be a good professor in the future.
Calculus II (B) 2021 Spring
Undergraduate course, Peking University, 2021
It was my last chance of teaching. I loved all the students in my class.
高数学习方法
Talk, Peking University, 2021
A talk to students from Lanzhou University